Theses most similar to those of author Park, Daniel K. (Daniel Kyu)
Web servers, databases, and algorithms for the analysis of protein interaction networks (2013) read it
Computational prediction of coiled-coil interaction structure specificity
Gutwin, Karl N. (Karl Nickolai) (2009)
- Advisor: Amy E. Keating
- Department of Biology
- Advisor: Bonnie Berger
- Department of Mathematics
Design of protein-protein interaction specificity using computational methods and experimental library screening
Chen, Tsan-Chou Scott (2012)
- Advisor: Amy Keating
- Department of Biology
Determining protein interaction specificity of native and designed bZIP family transcription factors
Reinke, Aaron W (2012)
- Advisor: Amy Keating
- Department of Biology
- Advisor: Bonnie Berger
- Department of Electrical Engineering and Computer Science
- Advisor: Bonnie Berger
- Department of Materials Science and Engineering
Incorporating diverse data to improve genetic network alignment with IsoRank
Eisner, Eric David (2011)
- Advisor: Bonnie Berger
- Department of Electrical Engineering and Computer Science
Simultaneous computational discovery of DNA regulatory motifs and transcription factor binding constraints at high spatial resolution
Guo, Yuchun (2012)
- Advisor: David K. Gifford
- Computational and Systems Biology Program
Predicting and testing determinants of histidine-kinase functions by leveraging protein sequence information
Ashenberg, Orr (2012)
- Advisors: Amy E. Keating; Michael T. Laub
- Computational and Systems Biology Program
Insights into protein function from evolutionary and conformational dynamics
Bransford, Philip W (2011)
- Advisors: Bathe, Mark, 1975-; Kamm, Roger D
- Department of Biological Engineering