Theses most similar to Web servers, databases, and algorithms for the analysis of protein interaction networks (Park, Daniel K. (Daniel Kyu); 2013) read it
Computational prediction of coiled-coil interaction structure specificity
Gutwin, Karl N. (Karl Nickolai) (2009)
- Advisor: Amy E. Keating
- Department of Biology
- Advisor: Bonnie Berger
- Department of Mathematics
Design of protein-protein interaction specificity using computational methods and experimental library screening
Chen, Tsan-Chou Scott (2012)
- Advisor: Amy Keating
- Department of Biology
Determining protein interaction specificity of native and designed bZIP family transcription factors
Reinke, Aaron W (2012)
- Advisor: Amy Keating
- Department of Biology
- Advisor: Bonnie Berger
- Department of Electrical Engineering and Computer Science
- Advisor: Bonnie Berger
- Department of Materials Science and Engineering
Incorporating diverse data to improve genetic network alignment with IsoRank
Eisner, Eric David (2011)
- Advisor: Bonnie Berger
- Department of Electrical Engineering and Computer Science
Simultaneous computational discovery of DNA regulatory motifs and transcription factor binding constraints at high spatial resolution
Guo, Yuchun (2012)
- Advisor: David K. Gifford
- Computational and Systems Biology Program
Predicting and testing determinants of histidine-kinase functions by leveraging protein sequence information
Ashenberg, Orr (2012)
- Advisors: Amy E. Keating; Michael T. Laub
- Computational and Systems Biology Program
Insights into protein function from evolutionary and conformational dynamics
Bransford, Philip W (2011)
- Advisors: Bathe, Mark, 1975-; Kamm, Roger D
- Department of Biological Engineering